Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.58■□□□□ 0.41
Pcdhb11Q91UZ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb11Q91UZ8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb11Q91UZ8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb11Q91UZ8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Gm5417-201ENSMUST00000079706 384 ntBASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb11Q91UZ8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb11Q91UZ8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb11Q91UZ8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhb11Q91UZ8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb11Q91UZ8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms