Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrcQ8VIM6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm12260-201ENSMUST00000122447 411 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm25911-201ENSMUST00000157621 56 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Fst-202ENSMUST00000223640 2612 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm14494-201ENSMUST00000118786 435 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm15467-201ENSMUST00000120582 445 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm7063-201ENSMUST00000186840 981 ntBASIC20.53■□□□□ 0.88
StrcQ8VIM6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
StrcQ8VIM6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
StrcQ8VIM6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.52■□□□□ 0.88
StrcQ8VIM6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Gm2213-201ENSMUST00000197485 688 ntBASIC20.52■□□□□ 0.88
StrcQ8VIM6 Gm10175-201ENSMUST00000086013 645 ntBASIC20.52■□□□□ 0.88
StrcQ8VIM6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
StrcQ8VIM6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
StrcQ8VIM6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
StrcQ8VIM6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.51■□□□□ 0.87
StrcQ8VIM6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrcQ8VIM6 Gm13036-201ENSMUST00000117799 748 ntBASIC20.5■□□□□ 0.87
StrcQ8VIM6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
StrcQ8VIM6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.5■□□□□ 0.87
StrcQ8VIM6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrcQ8VIM6 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.5■□□□□ 0.87
StrcQ8VIM6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Gm14140-201ENSMUST00000119999 995 ntBASIC20.49■□□□□ 0.87
StrcQ8VIM6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
StrcQ8VIM6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gm15173-201ENSMUST00000122049 433 ntBASIC20.48■□□□□ 0.87
StrcQ8VIM6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gm44430-201ENSMUST00000203376 995 ntBASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gm7506-201ENSMUST00000207758 815 ntBASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.48■□□□□ 0.87
StrcQ8VIM6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
StrcQ8VIM6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
StrcQ8VIM6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms