Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Gm6420-201ENSMUST00000193885 723 ntBASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab40cQ8VHQ4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Nespas-201ENSMUST00000143738 1083 ntBASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Gm38285-201ENSMUST00000192928 922 ntBASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Gm10493-201ENSMUST00000097270 612 ntBASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab40cQ8VHQ4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab40cQ8VHQ4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Gm42778-201ENSMUST00000199644 553 ntBASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab40cQ8VHQ4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab40cQ8VHQ4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Gm26596-201ENSMUST00000180464 2655 ntBASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rab40cQ8VHQ4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms