Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpa1Q8VEE4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpa1Q8VEE4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpa1Q8VEE4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpa1Q8VEE4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpa1Q8VEE4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpa1Q8VEE4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpa1Q8VEE4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.27■□□□□ 0.35
Rpa1Q8VEE4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpa1Q8VEE4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpa1Q8VEE4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpa1Q8VEE4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpa1Q8VEE4 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms