Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Sh3kbp1Q8R550 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3kbp1Q8R550 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Gm6659-201ENSMUST00000174752 547 ntBASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3kbp1Q8R550 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3kbp1Q8R550 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3kbp1Q8R550 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Gm18959-201ENSMUST00000208954 655 ntBASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Sh3kbp1Q8R550 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Gm38027-201ENSMUST00000192315 235 ntBASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sh3kbp1Q8R550 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms