Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chrna3Q8R4G9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chrna3Q8R4G9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chrna3Q8R4G9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.84■□□□□ 0.29
Chrna3Q8R4G9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Chrna3Q8R4G9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms