Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Gm27389-201ENSMUST00000183622 195 ntBASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.19■□□□□ 0.66
Atp2a1Q8R429 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Gm7213-201ENSMUST00000215977 950 ntBASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp2a1Q8R429 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp2a1Q8R429 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp2a1Q8R429 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.15■□□□□ 0.66
Atp2a1Q8R429 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.15■□□□□ 0.66
Atp2a1Q8R429 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Gm5587-201ENSMUST00000206270 674 ntBASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp2a1Q8R429 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atp2a1Q8R429 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Gm9013-201ENSMUST00000132939 882 ntBASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atp2a1Q8R429 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atp2a1Q8R429 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms