Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim29Q8R2Q0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim29Q8R2Q0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim29Q8R2Q0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim29Q8R2Q0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim29Q8R2Q0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim29Q8R2Q0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim29Q8R2Q0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim29Q8R2Q0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim29Q8R2Q0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Mir1199-201ENSMUST00000117015 119 ntBASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Gm22240-201ENSMUST00000175225 82 ntBASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim29Q8R2Q0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Gm10812-201ENSMUST00000099864 546 ntBASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim29Q8R2Q0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms