Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vmn1r28Q8R2C9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r28Q8R2C9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Gm7791-201ENSMUST00000219066 539 ntBASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r28Q8R2C9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r28Q8R2C9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Gm13559-201ENSMUST00000120476 863 ntBASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vmn1r28Q8R2C9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Gm17661-201ENSMUST00000170317 270 ntBASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Gm7889-201ENSMUST00000185591 958 ntBASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vmn1r28Q8R2C9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms