Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Treml1Q8K558 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.91■□□□□ 0.3
Treml1Q8K558 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Treml1Q8K558 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Gm11539-201ENSMUST00000119837 557 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Gm13436-201ENSMUST00000120418 567 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.9■□□□□ 0.3
Treml1Q8K558 Gm7791-201ENSMUST00000219066 539 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Treml1Q8K558 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Treml1Q8K558 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Treml1Q8K558 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.9■□□□□ 0.3
Treml1Q8K558 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Treml1Q8K558 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Treml1Q8K558 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Treml1Q8K558 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.89■□□□□ 0.3
Treml1Q8K558 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Gm43799-201ENSMUST00000201845 579 ntBASIC16.89■□□□□ 0.29
Treml1Q8K558 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Treml1Q8K558 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Treml1Q8K558 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.88■□□□□ 0.29
Treml1Q8K558 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.88■□□□□ 0.29
Treml1Q8K558 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.88■□□□□ 0.29
Treml1Q8K558 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.88■□□□□ 0.29
Treml1Q8K558 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.88■□□□□ 0.29
Treml1Q8K558 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.88■□□□□ 0.29
Treml1Q8K558 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Treml1Q8K558 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.88■□□□□ 0.29
Treml1Q8K558 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Treml1Q8K558 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Treml1Q8K558 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Treml1Q8K558 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Treml1Q8K558 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Treml1Q8K558 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Treml1Q8K558 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Treml1Q8K558 Mir7071-201ENSMUST00000184847 69 ntBASIC16.87■□□□□ 0.29
Treml1Q8K558 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Treml1Q8K558 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.87■□□□□ 0.29
Treml1Q8K558 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Treml1Q8K558 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Treml1Q8K558 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Treml1Q8K558 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms