Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Gm9731-201ENSMUST00000209480 747 ntBASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a1Q8K4Z5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3a1Q8K4Z5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Gm27463-201ENSMUST00000183569 57 ntBASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Gm7791-201ENSMUST00000219066 539 ntBASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a1Q8K4Z5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Gm11539-201ENSMUST00000119837 557 ntBASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Gm13436-201ENSMUST00000120418 567 ntBASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Il3ra-202ENSMUST00000223589 738 ntBASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a1Q8K4Z5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a1Q8K4Z5 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a1Q8K4Z5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms