Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alms1Q8K4E0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Olfr129-201ENSMUST00000122318 993 ntBASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Gm26039-201ENSMUST00000158152 144 ntBASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alms1Q8K4E0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Gm37935-201ENSMUST00000192012 982 ntBASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Gm18733-201ENSMUST00000173950 856 ntBASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alms1Q8K4E0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Alms1Q8K4E0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Alms1Q8K4E0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms