Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cystm1Q8K353 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm7290-201ENSMUST00000104990 617 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm12918-201ENSMUST00000120234 636 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm15710-201ENSMUST00000121821 636 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm5075-201ENSMUST00000196916 622 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 AC093043.3-201ENSMUST00000226531 2273 ntBASIC10.78□□□□□ -0.68
Cystm1Q8K353 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cystm1Q8K353 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cystm1Q8K353 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cystm1Q8K353 Gm42911-201ENSMUST00000199360 1630 ntBASIC10.76□□□□□ -0.69
Cystm1Q8K353 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cystm1Q8K353 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms