Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgcs1Q8JZK9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.38■□□□□ 0.21
Hmgcs1Q8JZK9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmgcs1Q8JZK9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmgcs1Q8JZK9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgcs1Q8JZK9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcs1Q8JZK9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms