Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
Syne4Q8CII8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.4■□□□□ 0.7
Syne4Q8CII8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.4■□□□□ 0.7
Syne4Q8CII8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Gm13186-201ENSMUST00000118031 316 ntBASIC19.4■□□□□ 0.7
Syne4Q8CII8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.4■□□□□ 0.7
Syne4Q8CII8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syne4Q8CII8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Syne4Q8CII8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Syne4Q8CII8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Syne4Q8CII8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Gm15372-201ENSMUST00000120729 834 ntBASIC19.39■□□□□ 0.69
Syne4Q8CII8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Phf7-203ENSMUST00000226565 1971 ntBASIC19.39■□□□□ 0.69
Syne4Q8CII8 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.39■□□□□ 0.69
Syne4Q8CII8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syne4Q8CII8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Syne4Q8CII8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syne4Q8CII8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Gm18206-201ENSMUST00000207027 926 ntBASIC19.37■□□□□ 0.69
Syne4Q8CII8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.37■□□□□ 0.69
Syne4Q8CII8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Syne4Q8CII8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.36■□□□□ 0.69
Syne4Q8CII8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Gm27525-201ENSMUST00000184465 107 ntBASIC19.36■□□□□ 0.69
Syne4Q8CII8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.36■□□□□ 0.69
Syne4Q8CII8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syne4Q8CII8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Gm12644-201ENSMUST00000119935 606 ntBASIC19.35■□□□□ 0.69
Syne4Q8CII8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syne4Q8CII8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms