Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip4Q8CI96 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.26■□□□□ 0.35
Clip4Q8CI96 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Mir1199-201ENSMUST00000117015 119 ntBASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm43183-201ENSMUST00000200632 547 ntBASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm42545-201ENSMUST00000202755 922 ntBASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip4Q8CI96 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Mir2861-201ENSMUST00000175539 82 ntBASIC17.25■□□□□ 0.35
Clip4Q8CI96 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clip4Q8CI96 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip4Q8CI96 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.23■□□□□ 0.35
Clip4Q8CI96 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.23■□□□□ 0.35
Clip4Q8CI96 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Gm37292-201ENSMUST00000192062 758 ntBASIC17.23■□□□□ 0.35
Clip4Q8CI96 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms