Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc28bQ8CEG5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc28bQ8CEG5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc28bQ8CEG5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Gm7514-201ENSMUST00000209475 934 ntBASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.95■□□□□ 0.3
Ccdc28bQ8CEG5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc28bQ8CEG5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Gm10493-201ENSMUST00000097270 612 ntBASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc28bQ8CEG5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.92■□□□□ 0.3
Ccdc28bQ8CEG5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc28bQ8CEG5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms