Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Alx1Q8C8B0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Alx1Q8C8B0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Alx1Q8C8B0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Alx1Q8C8B0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.01■□□□□ 0.79
Alx1Q8C8B0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Alx1Q8C8B0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Alx1Q8C8B0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Gm42900-201ENSMUST00000197184 2167 ntBASIC20■□□□□ 0.79
Alx1Q8C8B0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Alx1Q8C8B0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Gm22697-201ENSMUST00000175194 63 ntBASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx1Q8C8B0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.98■□□□□ 0.79
Alx1Q8C8B0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Gm13186-201ENSMUST00000118031 316 ntBASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx1Q8C8B0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms