Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.23■□□□□ 0.35
Pabpc5Q8C7D3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pabpc5Q8C7D3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pabpc5Q8C7D3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpc5Q8C7D3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpc5Q8C7D3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpc5Q8C7D3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpc5Q8C7D3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpc5Q8C7D3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpc5Q8C7D3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpc5Q8C7D3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpc5Q8C7D3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms