Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp44Q8C2S0 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Gm43799-201ENSMUST00000201845 579 ntBASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp44Q8C2S0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp44Q8C2S0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp44Q8C2S0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp44Q8C2S0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp44Q8C2S0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp44Q8C2S0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Usp44Q8C2S0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Usp44Q8C2S0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Usp44Q8C2S0 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.02■□□□□ 0.79
Usp44Q8C2S0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Usp44Q8C2S0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp44Q8C2S0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms