Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Dio3-201ENSMUST00000097228 1449 ntBASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim4Q8C1Q6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smim4Q8C1Q6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim4Q8C1Q6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Gm12896-201ENSMUST00000118430 226 ntBASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim4Q8C1Q6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Gm6576-201ENSMUST00000169678 883 ntBASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms