Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vps9d1Q8C190 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Vps9d1Q8C190 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gm12527-201ENSMUST00000117967 564 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gm26524-201ENSMUST00000192339 390 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Zfp783-201ENSMUST00000095946 670 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Vps9d1Q8C190 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Gm10418-201ENSMUST00000100943 576 ntBASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vps9d1Q8C190 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vps9d1Q8C190 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Gm20760-201ENSMUST00000179197 648 ntBASIC16.05■□□□□ 0.16
Vps9d1Q8C190 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vps9d1Q8C190 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Gm44549-201ENSMUST00000208351 577 ntBASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps9d1Q8C190 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms