Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Gm10812-201ENSMUST00000099864 546 ntBASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3rf3Q8C120 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3rf3Q8C120 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf3Q8C120 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf3Q8C120 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Gm715-201ENSMUST00000117865 831 ntBASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf3Q8C120 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf3Q8C120 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf3Q8C120 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms