Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.7■□□□□ 0.42
Trub1Q8C0D0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.7■□□□□ 0.42
Trub1Q8C0D0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trub1Q8C0D0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trub1Q8C0D0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Timm23-208ENSMUST00000226683 750 ntBASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trub1Q8C0D0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trub1Q8C0D0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Gm9731-201ENSMUST00000209480 747 ntBASIC17.66■□□□□ 0.42
Trub1Q8C0D0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.66■□□□□ 0.42
Trub1Q8C0D0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.66■□□□□ 0.42
Trub1Q8C0D0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.66■□□□□ 0.42
Trub1Q8C0D0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trub1Q8C0D0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trub1Q8C0D0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trub1Q8C0D0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms