Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab11fip4Q8BQP8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rab11fip4Q8BQP8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab11fip4Q8BQP8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab11fip4Q8BQP8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab11fip4Q8BQP8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab11fip4Q8BQP8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.01■□□□□ 0.63
Rab11fip4Q8BQP8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab11fip4Q8BQP8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Rab11fip4Q8BQP8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Gm10231-201ENSMUST00000181584 441 ntBASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Gm10175-202ENSMUST00000208752 441 ntBASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab11fip4Q8BQP8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab11fip4Q8BQP8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms