Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm12644-201ENSMUST00000119935 606 ntBASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Vti1a-206ENSMUST00000225529 1244 ntBASIC22.54■■□□□ 1.2
Col16a1Q8BLX7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col16a1Q8BLX7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col16a1Q8BLX7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.51■■□□□ 1.19
Col16a1Q8BLX7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 AC153794.1-201ENSMUST00000169148 126 ntBASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 AC138767.1-201ENSMUST00000222661 415 ntBASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Col16a1Q8BLX7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Gm6296-201ENSMUST00000222599 943 ntBASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col16a1Q8BLX7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Gm1401-201ENSMUST00000122048 772 ntBASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.48■■□□□ 1.19
Col16a1Q8BLX7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col16a1Q8BLX7 Gm7862-201ENSMUST00000121461 292 ntBASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms