Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim23Q8BGX0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Gm13836-201ENSMUST00000121159 501 ntBASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Gm18959-201ENSMUST00000208954 655 ntBASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim23Q8BGX0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Gm7370-201ENSMUST00000219471 767 ntBASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim23Q8BGX0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim23Q8BGX0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Gm13474-201ENSMUST00000122466 815 ntBASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.51■□□□□ 0.23
Trim23Q8BGX0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms