Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm13186-201ENSMUST00000118031 316 ntBASIC18.07■□□□□ 0.48
Npas4Q8BGD7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.07■□□□□ 0.48
Npas4Q8BGD7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npas4Q8BGD7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npas4Q8BGD7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Npas4Q8BGD7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Npas4Q8BGD7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Gm28659-201ENSMUST00000188013 759 ntBASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.05■□□□□ 0.48
Npas4Q8BGD7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Npas4Q8BGD7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Gm12895-201ENSMUST00000122214 226 ntBASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Gm27459-201ENSMUST00000184860 107 ntBASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Npas4Q8BGD7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.02■□□□□ 0.48
Npas4Q8BGD7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Npas4Q8BGD7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.01■□□□□ 0.47
Npas4Q8BGD7 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npas4Q8BGD7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npas4Q8BGD7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18■□□□□ 0.47
Npas4Q8BGD7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Npas4Q8BGD7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npas4Q8BGD7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npas4Q8BGD7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npas4Q8BGD7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18■□□□□ 0.47
Npas4Q8BGD7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Npas4Q8BGD7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms