Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Flg-201ENSMUST00000050758 1488 ntBASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Gm5408-201ENSMUST00000197998 747 ntBASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Krr1Q8BGA5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Krr1Q8BGA5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Krr1Q8BGA5 Idnk-204ENSMUST00000226010 1898 ntBASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.22■□□□□ 0.19
Krr1Q8BGA5 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Krr1Q8BGA5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krr1Q8BGA5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krr1Q8BGA5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krr1Q8BGA5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krr1Q8BGA5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krr1Q8BGA5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms