Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim65Q8BFW4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim65Q8BFW4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Gm37025-201ENSMUST00000195159 829 ntBASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Timm23-208ENSMUST00000226683 750 ntBASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim65Q8BFW4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim65Q8BFW4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms