Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Usp8Q80U87 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp8Q80U87 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp8Q80U87 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.23■□□□□ 0.35
Usp8Q80U87 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp8Q80U87 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp8Q80U87 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp8Q80U87 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp8Q80U87 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Mtag2-201ENSMUST00000058665 714 ntBASIC17.22■□□□□ 0.35
Usp8Q80U87 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp8Q80U87 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp8Q80U87 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp8Q80U87 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp8Q80U87 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp8Q80U87 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp8Q80U87 Mir6349-201ENSMUST00000184059 97 ntBASIC17.21■□□□□ 0.35
Usp8Q80U87 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp8Q80U87 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.21■□□□□ 0.35
Usp8Q80U87 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp8Q80U87 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp8Q80U87 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Usp8Q80U87 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.21■□□□□ 0.34
Usp8Q80U87 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp8Q80U87 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.21■□□□□ 0.34
Usp8Q80U87 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp8Q80U87 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Usp8Q80U87 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp8Q80U87 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp8Q80U87 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.2■□□□□ 0.34
Usp8Q80U87 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Mir8112-201ENSMUST00000184382 131 ntBASIC17.2■□□□□ 0.34
Usp8Q80U87 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp8Q80U87 Gm10138-203ENSMUST00000206952 366 ntBASIC17.2■□□□□ 0.34
Usp8Q80U87 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp8Q80U87 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp8Q80U87 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp8Q80U87 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.19■□□□□ 0.34
Usp8Q80U87 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.19■□□□□ 0.34
Usp8Q80U87 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Usp8Q80U87 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp8Q80U87 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp8Q80U87 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp8Q80U87 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Gm12896-201ENSMUST00000118430 226 ntBASIC17.18■□□□□ 0.34
Usp8Q80U87 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp8Q80U87 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms