Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh19Q80TF3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh19Q80TF3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Grk6-206ENSMUST00000224995 2971 ntBASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh19Q80TF3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdh19Q80TF3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh19Q80TF3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh19Q80TF3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh19Q80TF3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms