Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38bQ80SY5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Gm38285-201ENSMUST00000192928 922 ntBASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38bQ80SY5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Gm27357-201ENSMUST00000183754 135 ntBASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Gm18115-201ENSMUST00000221209 621 ntBASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Prpf38bQ80SY5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Gm13474-201ENSMUST00000122466 815 ntBASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Gm29518-201ENSMUST00000190858 372 ntBASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf38bQ80SY5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf38bQ80SY5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Gm27389-201ENSMUST00000183622 195 ntBASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf38bQ80SY5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms