Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh8Q7TSK3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gm37025-201ENSMUST00000195159 829 ntBASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh8Q7TSK3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh8Q7TSK3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh8Q7TSK3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Pcdh8Q7TSK3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh8Q7TSK3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Pcdh8Q7TSK3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh8Q7TSK3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh8Q7TSK3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh8Q7TSK3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms