Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3d21Q7TSG5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sh3d21Q7TSG5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Gm12085-201ENSMUST00000119263 940 ntBASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sh3d21Q7TSG5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
Sh3d21Q7TSG5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3d21Q7TSG5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3d21Q7TSG5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh3d21Q7TSG5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3d21Q7TSG5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sh3d21Q7TSG5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3d21Q7TSG5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3d21Q7TSG5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3d21Q7TSG5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3d21Q7TSG5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3d21Q7TSG5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms