Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn4bQ7M729 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn4bQ7M729 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Scn4bQ7M729 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn4bQ7M729 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn4bQ7M729 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn4bQ7M729 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn4bQ7M729 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn4bQ7M729 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.67■□□□□ 0.26
Scn4bQ7M729 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Mir1199-201ENSMUST00000117015 119 ntBASIC16.67■□□□□ 0.26
Scn4bQ7M729 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.67■□□□□ 0.26
Scn4bQ7M729 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn4bQ7M729 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Gm12085-201ENSMUST00000119263 940 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms