Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tmed3Q78IS1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tmed3Q78IS1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tmed3Q78IS1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tmed3Q78IS1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tmed3Q78IS1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tmed3Q78IS1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tmed3Q78IS1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tmed3Q78IS1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tmed3Q78IS1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tmed3Q78IS1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.42□□□□□ -0.1
Tmed3Q78IS1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms