Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.44□□□□□ -0.1
Rif1Q6PR54 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.44□□□□□ -0.1
Rif1Q6PR54 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.44□□□□□ -0.1
Rif1Q6PR54 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Gm25857-201ENSMUST00000082788 129 ntBASIC14.44□□□□□ -0.1
Rif1Q6PR54 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.44□□□□□ -0.1
Rif1Q6PR54 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rif1Q6PR54 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.43□□□□□ -0.1
Rif1Q6PR54 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Rprl3-201ENSMUST00000157400 290 ntBASIC14.43□□□□□ -0.1
Rif1Q6PR54 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.43□□□□□ -0.1
Rif1Q6PR54 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rif1Q6PR54 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Gm13616-201ENSMUST00000120600 222 ntBASIC14.42□□□□□ -0.1
Rif1Q6PR54 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rif1Q6PR54 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.41□□□□□ -0.1
Rif1Q6PR54 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Gm13823-201ENSMUST00000119930 345 ntBASIC14.41□□□□□ -0.1
Rif1Q6PR54 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.41□□□□□ -0.1
Rif1Q6PR54 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rif1Q6PR54 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Gm7230-201ENSMUST00000173026 815 ntBASIC14.4□□□□□ -0.1
Rif1Q6PR54 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rif1Q6PR54 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms