Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rad54bQ6PFE3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rad54bQ6PFE3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rad54bQ6PFE3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Gm10602-201ENSMUST00000098239 609 ntBASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rad54bQ6PFE3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rad54bQ6PFE3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms