Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Gm27704-201ENSMUST00000185094 107 ntBASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Gm17808-201ENSMUST00000200859 894 ntBASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Smchd1Q6P5D8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Gm11355-201ENSMUST00000121120 306 ntBASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Gm27389-201ENSMUST00000183622 195 ntBASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smchd1Q6P5D8 Gm25016-201ENSMUST00000158399 131 ntBASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Gm18421-201ENSMUST00000204122 625 ntBASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smchd1Q6P5D8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Smchd1Q6P5D8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smchd1Q6P5D8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smchd1Q6P5D8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smchd1Q6P5D8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smchd1Q6P5D8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smchd1Q6P5D8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Gm26039-201ENSMUST00000158152 144 ntBASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Gm17971-201ENSMUST00000190239 806 ntBASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smchd1Q6P5D8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smchd1Q6P5D8 Gm11336-201ENSMUST00000118168 334 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms