Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.22■□□□□ 0.67
Abcf1Q6P542 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.22■□□□□ 0.67
Abcf1Q6P542 Gm29791-202ENSMUST00000207888 369 ntBASIC19.22■□□□□ 0.67
Abcf1Q6P542 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abcf1Q6P542 Dio3-201ENSMUST00000097228 1449 ntBASIC19.22■□□□□ 0.67
Abcf1Q6P542 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Gm13216-201ENSMUST00000117145 591 ntBASIC19.21■□□□□ 0.67
Abcf1Q6P542 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.21■□□□□ 0.67
Abcf1Q6P542 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Flg-201ENSMUST00000050758 1488 ntBASIC19.21■□□□□ 0.67
Abcf1Q6P542 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcf1Q6P542 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Abcf1Q6P542 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Gm27275-201ENSMUST00000184318 272 ntBASIC19.2■□□□□ 0.66
Abcf1Q6P542 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.2■□□□□ 0.66
Abcf1Q6P542 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Abcf1Q6P542 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.2■□□□□ 0.66
Abcf1Q6P542 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcf1Q6P542 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.19■□□□□ 0.66
Abcf1Q6P542 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcf1Q6P542 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.19■□□□□ 0.66
Abcf1Q6P542 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Gm13168-201ENSMUST00000121771 632 ntBASIC19.18■□□□□ 0.66
Abcf1Q6P542 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Gm22240-201ENSMUST00000175225 82 ntBASIC19.18■□□□□ 0.66
Abcf1Q6P542 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Abcf1Q6P542 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Gm10418-201ENSMUST00000100943 576 ntBASIC19.17■□□□□ 0.66
Abcf1Q6P542 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.17■□□□□ 0.66
Abcf1Q6P542 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.17■□□□□ 0.66
Abcf1Q6P542 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcf1Q6P542 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcf1Q6P542 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms