Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.42■□□□□ 0.38
Sp140Q6NSQ5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sp140Q6NSQ5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Gm20760-201ENSMUST00000179197 648 ntBASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sp140Q6NSQ5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
Sp140Q6NSQ5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sp140Q6NSQ5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sp140Q6NSQ5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Sp140Q6NSQ5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.39■□□□□ 0.38
Sp140Q6NSQ5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sp140Q6NSQ5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sp140Q6NSQ5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Gm13168-201ENSMUST00000121771 632 ntBASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sp140Q6NSQ5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sp140Q6NSQ5 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms