Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.01■□□□□ 0.47
Scube3Q66PY1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18■□□□□ 0.47
Scube3Q66PY1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18■□□□□ 0.47
Scube3Q66PY1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scube3Q66PY1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Scube3Q66PY1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18■□□□□ 0.47
Scube3Q66PY1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scube3Q66PY1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scube3Q66PY1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scube3Q66PY1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms