Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr1Q64729 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr1Q64729 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr1Q64729 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr1Q64729 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tgfbr1Q64729 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Gm29791-202ENSMUST00000207888 369 ntBASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tgfbr1Q64729 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Gm2399-201ENSMUST00000104944 225 ntBASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tgfbr1Q64729 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr1Q64729 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.02□□□□□ -0.17
Tgfbr1Q64729 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr1Q64729 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms