Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.48■□□□□ 0.23
Sdc3Q64519 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sdc3Q64519 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdc3Q64519 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.47■□□□□ 0.23
Sdc3Q64519 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Gm24841-201ENSMUST00000158676 357 ntBASIC16.47■□□□□ 0.23
Sdc3Q64519 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.47■□□□□ 0.23
Sdc3Q64519 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.47■□□□□ 0.23
Sdc3Q64519 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sdc3Q64519 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdc3Q64519 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm10231-201ENSMUST00000181584 441 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sdc3Q64519 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm7977-201ENSMUST00000193787 748 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Gm10175-202ENSMUST00000208752 441 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sdc3Q64519 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.46■□□□□ 0.23
Sdc3Q64519 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc3Q64519 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdc3Q64519 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdc3Q64519 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdc3Q64519 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.45■□□□□ 0.22
Sdc3Q64519 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc3Q64519 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc3Q64519 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc3Q64519 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sdc3Q64519 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms