Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Six2Q62232 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Six2Q62232 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.25■□□□□ 0.51
Six2Q62232 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.25■□□□□ 0.51
Six2Q62232 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Six2Q62232 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six2Q62232 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Six2Q62232 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Six2Q62232 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.24■□□□□ 0.51
Six2Q62232 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Gm22240-201ENSMUST00000175225 82 ntBASIC18.24■□□□□ 0.51
Six2Q62232 Gm27000-201ENSMUST00000182943 842 ntBASIC18.24■□□□□ 0.51
Six2Q62232 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.24■□□□□ 0.51
Six2Q62232 Il3ra-202ENSMUST00000223589 738 ntBASIC18.24■□□□□ 0.51
Six2Q62232 Timm23-208ENSMUST00000226683 750 ntBASIC18.24■□□□□ 0.51
Six2Q62232 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Six2Q62232 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Six2Q62232 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.24■□□□□ 0.51
Six2Q62232 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.24■□□□□ 0.51
Six2Q62232 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six2Q62232 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.23■□□□□ 0.51
Six2Q62232 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Haglr-201ENSMUST00000100000 2085 ntBASIC18.23■□□□□ 0.51
Six2Q62232 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.23■□□□□ 0.51
Six2Q62232 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Gm3375-201ENSMUST00000203929 796 ntBASIC18.23■□□□□ 0.51
Six2Q62232 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.23■□□□□ 0.51
Six2Q62232 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six2Q62232 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.22■□□□□ 0.51
Six2Q62232 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Six2Q62232 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six2Q62232 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six2Q62232 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.21■□□□□ 0.51
Six2Q62232 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.21■□□□□ 0.51
Six2Q62232 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms