Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.13■□□□□ 0.17
VcanQ62059 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VcanQ62059 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.13■□□□□ 0.17
VcanQ62059 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.13■□□□□ 0.17
VcanQ62059 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VcanQ62059 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.12■□□□□ 0.17
VcanQ62059 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VcanQ62059 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.12■□□□□ 0.17
VcanQ62059 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VcanQ62059 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.12■□□□□ 0.17
VcanQ62059 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VcanQ62059 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.11■□□□□ 0.17
VcanQ62059 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
VcanQ62059 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.11■□□□□ 0.17
VcanQ62059 Gm14140-201ENSMUST00000119999 995 ntBASIC16.11■□□□□ 0.17
VcanQ62059 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VcanQ62059 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VcanQ62059 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.1■□□□□ 0.17
VcanQ62059 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Grk6-207ENSMUST00000225925 2769 ntBASIC16.1■□□□□ 0.17
VcanQ62059 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VcanQ62059 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.1■□□□□ 0.17
VcanQ62059 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.1■□□□□ 0.17
VcanQ62059 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VcanQ62059 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.1■□□□□ 0.17
VcanQ62059 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VcanQ62059 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.09■□□□□ 0.17
VcanQ62059 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
VcanQ62059 Gm5745-201ENSMUST00000183748 313 ntBASIC16.09■□□□□ 0.17
VcanQ62059 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
VcanQ62059 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.09■□□□□ 0.17
VcanQ62059 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VcanQ62059 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 Tgds-204ENSMUST00000228543 1594 ntBASIC16.09■□□□□ 0.17
VcanQ62059 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VcanQ62059 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.09■□□□□ 0.17
VcanQ62059 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VcanQ62059 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.08■□□□□ 0.17
VcanQ62059 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
VcanQ62059 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
VcanQ62059 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VcanQ62059 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.08■□□□□ 0.16
VcanQ62059 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.08■□□□□ 0.16
VcanQ62059 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VcanQ62059 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.07■□□□□ 0.16
VcanQ62059 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.07■□□□□ 0.16
VcanQ62059 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms