Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Zic4Q61467 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Zic4Q61467 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.93□□□□□ -0.18
Zic4Q61467 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Zic4Q61467 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Zic4Q61467 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Zic4Q61467 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.92□□□□□ -0.18
Zic4Q61467 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Zfp783-201ENSMUST00000095946 670 ntBASIC13.92□□□□□ -0.18
Zic4Q61467 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.92□□□□□ -0.18
Zic4Q61467 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Zic4Q61467 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Zic4Q61467 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Zic4Q61467 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.91□□□□□ -0.18
Zic4Q61467 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.91□□□□□ -0.18
Zic4Q61467 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.91□□□□□ -0.18
Zic4Q61467 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Zic4Q61467 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.91□□□□□ -0.18
Zic4Q61467 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Gm42778-201ENSMUST00000199644 553 ntBASIC13.91□□□□□ -0.18
Zic4Q61467 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.91□□□□□ -0.18
Zic4Q61467 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Zic4Q61467 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Zic4Q61467 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.9□□□□□ -0.18
Zic4Q61467 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Zic4Q61467 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Zic4Q61467 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Zic4Q61467 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Zic4Q61467 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Zic4Q61467 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Zic4Q61467 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.89□□□□□ -0.19
Zic4Q61467 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Zic4Q61467 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Zic4Q61467 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Zic4Q61467 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.89□□□□□ -0.19
Zic4Q61467 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.89□□□□□ -0.19
Zic4Q61467 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms