Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.82■□□□□ 0.12
Clcn4Q61418 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.82■□□□□ 0.12
Clcn4Q61418 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clcn4Q61418 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clcn4Q61418 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Clcn4Q61418 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Gm6576-201ENSMUST00000169678 883 ntBASIC15.81■□□□□ 0.12
Clcn4Q61418 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.81■□□□□ 0.12
Clcn4Q61418 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.81■□□□□ 0.12
Clcn4Q61418 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcn4Q61418 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.8■□□□□ 0.12
Clcn4Q61418 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Mir7071-201ENSMUST00000184847 69 ntBASIC15.8■□□□□ 0.12
Clcn4Q61418 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clcn4Q61418 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clcn4Q61418 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clcn4Q61418 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcn4Q61418 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clcn4Q61418 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcn4Q61418 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Mir6982-201ENSMUST00000184354 68 ntBASIC15.78■□□□□ 0.12
Clcn4Q61418 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.78■□□□□ 0.12
Clcn4Q61418 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcn4Q61418 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.77■□□□□ 0.12
Clcn4Q61418 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms