Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.01■□□□□ 0.63
Ift88Q61371 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ift88Q61371 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.01■□□□□ 0.63
Ift88Q61371 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ift88Q61371 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ift88Q61371 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ift88Q61371 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ift88Q61371 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ift88Q61371 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19■□□□□ 0.63
Ift88Q61371 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Gm13216-201ENSMUST00000117145 591 ntBASIC19■□□□□ 0.63
Ift88Q61371 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ift88Q61371 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.99■□□□□ 0.63
Ift88Q61371 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.99■□□□□ 0.63
Ift88Q61371 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.99■□□□□ 0.63
Ift88Q61371 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.99■□□□□ 0.63
Ift88Q61371 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ift88Q61371 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ift88Q61371 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
Ift88Q61371 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ift88Q61371 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.98■□□□□ 0.63
Ift88Q61371 Gm37179-201ENSMUST00000194862 823 ntBASIC18.98■□□□□ 0.63
Ift88Q61371 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ift88Q61371 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.98■□□□□ 0.63
Ift88Q61371 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ift88Q61371 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ift88Q61371 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ift88Q61371 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ift88Q61371 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.97■□□□□ 0.63
Ift88Q61371 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.97■□□□□ 0.63
Ift88Q61371 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.97■□□□□ 0.63
Ift88Q61371 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.97■□□□□ 0.63
Ift88Q61371 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Ift88Q61371 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ift88Q61371 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Ift88Q61371 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ift88Q61371 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ift88Q61371 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.97■□□□□ 0.63
Ift88Q61371 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.97■□□□□ 0.63
Ift88Q61371 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.96■□□□□ 0.63
Ift88Q61371 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ift88Q61371 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms